Читать онлайн «Виролюция. Важнейшая книга об эволюции после «Эгоистичного гена» Ричарда Докинза». Страница 60

Villarreal L. The source of self: genetic parasites and the origin of adaptive immunity. Annals of the New York Academy of Sciences (in press).

Weiss R. A. The discovery of endogenous retroviruses. Retrovirology 2006; 3:67 Online at doi: 10.1186/1742–4690-3–67.

Harris J. R. Placental endogenous retrovirus (ERV): structural, functional and evolutionary significance. Bioessays 1998; 20: 307–316.

Martin M. A., Bryan T., Rasheed S., Khan A. S. Identification and cloning of endogenous retroviral sequences present in human DNA. Proceedings of the National Academy of Sciences 1981; 78 (8): 4892–6. Cohen M., Rein A., Stephens R. M., et al. Baboon endogenous virus genome: molecular cloning and structural characterisation of nondefective viral genomes from DNA of a baboon cell strain. Proceedings of the National Academy of Sciences 1981; 78 (8): 5207–11.

O’Connell C., O’Brien S., Nash W. G., Cohen M. ERV3, a full-length human endogenous provirus: chromosomal localization and evolutionary relationships. Virology 1984; 138: 225–235.

Ono M. Molecular cloning and long terminal repeat sequences of human endogenous retrovirus genes related to types A and В retrovirus genes. Journal of Virology 1986; 58 (3): 937–944.

Britten R. J. DNA sequence insertion and evolutionary variation in gene regulation. Proceedings of the National Academy of Sciences 1996; 93: 9374–7.

O’Neill R.J.W., Eldredge М. D. В., Graves J. А. М. Chromosome heterozygosity and de novo chromosome rearrangements in mammalian interspecies hybrids. Mammalian Genome 2001; 12: 256–259.

Sverdlov E. D. Retroviruses and human evolution. Bio Essays 2000; 22: 161–171.

Hughes J. F.,Coffin J. M. Human endogenous retrovirus К solo-LTR formation and insertional polymorphisms: implications for human and viral evolution. Proceedings of the National Academy of Sciences 2004; 101: 1668–72.

Mi S., Lee X., Li X., et al. Syncytin is a captive retroviral envelope protein involved in human placental morphogenesis. Nature 2000; 403: 785–9.

Blond J.-L., Lavillette D., Cheynet V., et al. An envelope glycoprotein of the human endogenous retrovirus HERV-W is expressed in the human placenta and fuses cells expressing the type D mammalian retrovirus receptor. Journal of Virology 2000; 74: 3321–9.

Blaise S., de Parseval N., Bénit L., Heidmann T. Genomewide screening for fusogenic human endogenous retrovirus envelopes identifies syncytin 2, a gene conserved on primate evolution. Proceedings of the National Academy of Sciences 2003; 100:13 013-8.

Bonnaud B., Bouton О., Oriol G., et al. Evidence of selection on the domesticated ERVWE1 env retroviral element involved in placentation. Molecular Biology and Evolution 2004; 21:1895–901.

Andersson A.-C., Merza M., Venables P., et al. Elevated levels of the endogenous retrovirus ERV3 in human sebaceous glands. Journal of Investigative Dermatology 1996; 106: 125–128.

Andersson A.-C., Venables P., Tonjes R. R., et al. Developmental expression of HERV-R (ERV-3) and HERV-K in human tissue. Virology 2002; 297: 220–225.

De Parseval N., Lazar V., Casella J.-F., et al. Survey of human genes of retroviral origin: identification and transcriptome of the genes with coding capacity for complete envelope proteins. Journal of Virology 2003: 77 (19): 10 414-22.

Nekrutenko A., Li W.-H. Transposable elements are found in a large number of human protein-coding genes. Trends in Genetics 2001; 17(11): 619–621.

Van Lagemaat L.N., Landre J.-R., Mager D.L., Medstrand P. Transposable elements in mammals promote regulated variations in diversifications of genes with specialized functions. Trends in Genetics 2003; 19 (10): 530–6.

Seifarth W.,Frank O., Zeilfelder U., et al. Comprehensive analysis of human endogenous retrovirus transcriptional activity inhuman tissues with a retrovirus-specific microarray. Journal of Virology 2005; 79: 341–52.

Flockerzi A., Ruggieri A., Frank О., et al. Expression patterns of transcribed human endogenous retrovirus HERV-K (HML-2) loci in human tissues and the need for a HERV transcriptome project. BMC Genomics 2008; 9: 354. Online at doi:10.1186/ 1471–2164-9–354.

Thomas L. The Lives of a Cell. London and New York: Penguin Books 1978.

Bosch Е., Jobling M.A. Duplications of the AZFa region of the humanY chromosome are mediated by homologous recombination between HERVs and are compatible with male fertility. Human Molecular Genetics 2003; 12 (3): 341–347.

Zody M.C., Garber M., Adams D. J., et al. DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage. Nature 2006; 440: 1045–9.

Kazazian H.H., Wong С., Youssoufian H., et al. Haemophilia A resulting from de novo insertion of LI sequences represents a novel mechanism for mutation in man. Nature 1988; 332: 164–166. Narita N., Nishio H., Kitoh Y., et al. Insertion of a 5’ truncated L1 element into the 3’ end of exon 44 in the dystrophin gene resulted in skip of the exon during splicing in a case of Duchenne muscular dystrophy. Journal of Clinical Investigation 1993; 91 (5): 1862–7. Holmes S. E., Dombroski B.A., Krebs C., et al. A new retrotransposable human L1 element from the LRE2 locus on chromosome 1q produces a chimaeric insertion. Nature Genetics 1994; 7: 143–148.

Batzer MA, Deininger PL. Alu repeats and human genomic diversity. Nature Reviews Genetics 2002; 3: 370–380. Sukarova E, Dimovski AJ, Tchacarova P., etal. An alu insert as the cause of a severe form of hemophilia A. Acta haematologica 2001; 106 (3): 126–129.

Перевод Б. Пастернака. — Прим. ред.

Ужас самоотравления (англ.).

Krieg A.M., Steinberg A. D. Retroviruses and autoimmunity. Journal of Autoimmunity 1990; 3: 137–166.

Villarreal L. The source of self: genetic parasites and the origin of adaptive immunity. Annals of the New York Academy of Sciences (in press).

Dawkins R., Leelayuwat C., Gaudieri S., et al. Genomics of the major histocompatibility complex: haplotypes, duplication, retroviruses and disease. Immunological Reviews 1999; 167: 275–304.

Perron H., Jouvin-Marche E., Ounanian-Paraz A., et al. Multiple sclerosis retrovirus particles and recombinant envelope trigger an abnormal immune response in vitro, by inducing polyclonal V 16-T-lymphocyte activation. Virology 2001; 287: 321–332.

Dolei A., Serra С., Mameli G., et al. Multiple sclerosis-associated retrovirus (MSRV) in Sardinian MS patients. Neurology 2002; 58: 471–473.

Anthony J. М., van Marie G., Opii W., et al. Human endogenous retrovirus glycoprotein-mediated induction of redox reactants causes oligodendrocyte death and demyelination. Nature Neuroscience 2004; 7 (10): 1088–95.

Секвенирование — определение последовательности нуклеотидов в гене. — Прим. ред.

Yasumoto K., Horiuchi T., Kagami S., et al. Mutation of DNASE1 in people with systemic lupus erythematosus. Nature Genetics 2001; 28: 313–314.

Sekigawa l., Ogasawara H., Naito T., et al. Systemic lupus erythematosus and human endogenous retroviruses. Modern Rheumatology 2003; 13:107–113.

Stetson D.B., Ko J.S., Heidmann T., et al. Trex 1 prevents cellintrinsic initiation of autoimmunity. Cell 2008; 134: 587–598.

Weiss R. А. Retroviruses and cancer. Current Science 2001; 81 (5): 528–534.

http://en.wikipedia.org/wiki/Harald_zur_Hausen.

Dunlap К. А., Palmarini M., Varela М., et al. Endogenous retroviruses regulate periimplantation placental growth and differentiation. Proceedings of the National Academy of Sciences 2006; 103 (39): 14 390-5.

Cousens C., Bishop J.V., Philbey A.W., et al. Analysis of Integration sites of Jaagsietke sheep retrovirus in ovine pulmonary adenocarcinoma. Journal of Virology 2004; 78 (16): 8506–12.

Более подробное описание этих исследований и обсуждение результатов можно найти в работе Ryan F. P. An alternative approach to medical genetics based on modern evolutionary biology. Part 4: HERVs in cancer. Journal of the Royal Society of Medicine 2009: (in press).

Guasch G., Popovici C., Mugneret F., et al. Endogenous retroviral sequence is fused to FGFR1 kinase in the 8p 12 stemcell myeloproliferative disorder with t (8; 19) (pl2; q13.3). Blood 2003; 101 (1): 286–288.

Schulte A. M., Shoupeng L., Kurtz A., et al. Human trophoblast and choriocarcinoma expression of the growth factor pleiotrophin attributable to germ line insertion of an endogenous retrovirus. Proceedings of the National Academy of Sciences 1996; 93: 14 759-64.

Более подробное описание этих исследований и дальнейшие ссылки можно найти в работе: Ryan F. P. An alternative approach to medical genetics based on modem evolutionary biology. Part 4: HERVs in cancer. Journal of the Royal Society of Medicine 2009: (in press).

Ruprecht K., Mayer J., Sauter М., et al. Endogenous retroviruses and cancer. Cellular and Molecular Life Sciences, 2008; 65: 3366–82.

Montagna M., Santacatterina M., Torri A., et al. Identification of a 3kb Alu-mediated BRCA1 gene rearrangement in two breast/ovarian cancer families. Oncogene 1999; 18 (28): 4160–5.

O’Neil J., Tchinda J., Gutierrez A., et al. Alu elements mediate MYB gene tandem duplication in human T-ALL. Journal of Experimental Medicine 2007; 204 (13): 3059–66.

Fukuuchi A., Nagamura Y., Yaguchi H., et al. A wholeMEN1 gene deletion flanked by Alu repeats in a family with multiple endocrine neoplasia type 1. Japanese Journal of Clinical Oncology 2006; 36 (11): 739–744.

Более подробное описание этих исследований и дальнейшие ссылки можно найти в работе: Ryan F.P. An alternative approach to medical genetics based on modem evolutionary biology. Part 4: HERVs in cancer. Journal of the Royal Society of Medicine 2009: (in press).

Serafïno A., Balestrieri E., Pierimarchi P., et al. The activation of human endogenous retrovirus К (HERV-K) is implicated in melanoma cell malignant transformation. Experimental Cell Research 2009; 315: 849–862.

Smith С.Н. The Alfred Russel Wallace Page.

Gardiner B., Milner R., Morris M. (eds). Wallace defends Darwin’s Priority — 50 years on. In Survival of the Fittest: Celebrating the 150th anniversary of the Darwin-Wallace Theory of Evolution. The Linnean Society Special Issue № 9 2008: 47.

Roossinck M. J. Symbiosis versus competition in plant evolution. Nature Reviews Microbiology 2005; 3: 917–924.